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Fully Determined GlyTouCan Glycan Data

glydb_data.Rd

A curated dataset of fully determined glycans from GlyTouCan. "Fully determined" means that all linkages, substituents, anomers, and monosaccharides are fully specified. The dataset is derived from the GlyTouCan v2.11.1 release, with 7,125 glycan structures currently available.

Usage

glydb_data

Format

A tibble with 7,125 rows and 5 variables:

  • glytoucan_ac: GlyTouCan accession.

  • glycan_structure: Glycan structure (glyrepr::glycan_structure()).

  • glycan_composition: Glycan composition (glyrepr::glycan_composition()).

  • species: Specie names, separated by semicolons. Unknown species are NAs.

  • glycan_type: Glycan type, one of "N", "O-GalNAc", "O-GlcNAc", "O-Man", "O-Fuc", "O-Glc".

Source

https://data.glygen.org