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GlyGen Glycan Data

glydb_data.Rd

A curated dataset glycan structures from GlyGen Data v2.11.1, with 19,436 glycan structures currently available.

Usage

glydb_data

Format

A tibble with 19,436 rows and 6 variables:

  • glytoucan_ac: GlyTouCan accession.

  • glycan_structure: Glycan structure (glyrepr::glycan_structure()).

  • glycan_composition: Glycan composition (glyrepr::glycan_composition()).

  • species: Specie names, separated by semicolons. Unknown species are NAs.

  • glycan_type: Glycan type, such as "HMO", "N", "GSL", "GAG", "O", "O-GalNAc", "O-GlcNAc", "O-Man", "O-Fuc", "O-Glc", or "GPI".

  • confidence: Confidence score used to rank glycans.

Source

https://data.glygen.org