Changelog

glydb 0.3.1

Minor improvements and bug fixes

• glydb now depends on CRAN version of glyrepr 0.9.0.

glydb 0.3.0

New features

• Add a glycan_type column to glydb_data. Can be “N”, “O-GalNAc”, “O-GlcNAc”, “O-Man”, “O-Fuc”, “O-Glc”.
• Add a glycan_type parameter to glydb_compositions() and glydb_structures().

glydb 0.2.1

Minor improvements and bug fixes

• Fix the bug that glydb_species() fails when the package is used via glydb::fun and not attached with library(glydb).

glydb 0.2.0

Breaking changes

• Remove the topology_glycans dataset.
• Rename the fully_determined_glycans dataset to glydb_data.

New features

• Add glydb_species() to get the species names from glydb_data.
• Add glydb_compositions() to get the glycan compositions from glydb_data with different monosaccharide types.
• Add glydb_structures() to get the glycan structures from glydb_data with different structure levels.

Minor improvements and bug fixes

• Update the documentation of glydb_data to explain the duplicate glycan structures in the dataset.

glydb 0.1.1

Minor improvements and bug fixes

• Update the topology_glycans dataset to remove some duplicates.

glydb 0.1.0

• Initial Github release.