Convert a glycoproteomics experiment to pseudo-glycomes

Converts a GlycoproteomicSE() into one GlycomicSE() for each complete (protein, protein_site) pair in its row data.

Usage

as_pseudo_glycomes(exp, aggr_method = c("sum", "mean", "median"))

Arguments

exp

A GlycoproteomicSE().

aggr_method

Aggregation method to use. One of "sum", "mean", or "median". Default is "sum".

Value

A named list of GlycomicSE() objects. List names identify each glycosite as {protein}-{protein_site}.