Changelog

glyparse 0.4.2

Minor improvements and fixes

• Fix some incorrect structure strings in vignettes.

glyparse 0.4.1

Minor improvements and fixes

• Fix some incorrect structure strings in tests and documentations.
• Remove some legacy documentations.

glyparse 0.4.0

Breaking changes

• parse_iupac_condensed() and parse_iupac_short() now require the reducing-end monosaccharide to have anomer information. For example, “Neu5Ac(a2-” and “Neu5Aca-” are valid, but “Neu5Ac” is not.

glyparse 0.3.1

Minor improvements and fixes

• parse_pglyco_struc() now support “aH” and “pH” monosaccharides.

glyparse 0.3.0

New features

• Add auto_parse() to automatically detect and parse different glycan structure string formats.

Minor improvements and fixes

• Better error messages. Before:

  > parse_iupac_condensed("bad_glycan")

  Error in `purrr::map()` at glyparse/R/struc-parser-wrapper.R:13:3:
  ℹ In index: 1.
  Caused by error in `value[[3L]]()`:
  ! Could not parse IUPAC-condensed string: {.val {x}}
  ℹ Invalid characters or format in IUPAC-condensed string
  Run `rlang::last_trace()` to see where the error occurred.

  Now:

  > parse_iupac_condensed("bad_glycan")

  Error in `parse_iupac_condensed()`:
  ! Can't parse: "bad_glycan"
  Run `rlang::last_trace()` to see where the error occurred.

glyparse 0.2.1

Minor improvements and fixes

• Update README.
• A “Get Started” vignette is added.

glyparse 0.2.0

Major improvements

• Add parse_glycoct() to parse glycans in GlycoCT format.

glyparse 0.1.2

Minor improvements

• parse_iupac_short(), parse_iupac_extended(), parse_iupac_condensed(), parse_wurcs() now support multiple substituents on the same monosaccharide, to align with the updates in glyrepr v0.5.0.