Package index
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add_site_seq() - Add site-specific sequence information.
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adjust_protein() - Adjust Protein Expression
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aggregate()glyclean_aggregate(<glyexp_experiment>)glyclean_aggregate(<default>) - Aggregate Data
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auto_aggregate() - Automatic Aggregation
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auto_clean() - Automatic Data Preprocessing
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auto_correct_batch_effect() - Automatic Batch Correction
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auto_impute() - Automatic Imputation
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auto_normalize() - Automatic Normalization
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auto_remove() - Automatic Removing Variables
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correct_batch_effect() - Correct Batch Effect
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detect_batch_effect() - Detect batch effect
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impute_bpca() - BPCA Imputation
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impute_fw_knn() - Feature-wise KNN Imputation
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impute_half_sample_min() - Half Sample Minimum Imputation
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impute_min_prob() - Minimum Probability Imputation
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impute_miss_forest() - MissForest Imputation
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impute_ppca() - PPCA Imputation
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impute_sample_min() - Sample Minimum Imputation
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impute_svd() - SVD Imputation
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impute_sw_knn() - Sample-wise KNN Imputation
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impute_zero() - Zero Imputation
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normalize_loesscyc() - LoessCyc Normalization
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normalize_loessf() - LoessF Normalization
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normalize_median() - Median Normalization
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normalize_median_abs() - Absolute Median Normalization
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normalize_median_quotient() - Median Quotient Normalization
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normalize_quantile() - Quantile Normalization
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normalize_rlr() - Robust Linear Regression Normalization
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normalize_rlrma() - Robust Linear Regression with Median Adjustment Normalization
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normalize_rlrmacyc() - Robust Linear Regression with Median Adjustment and Cyclic Normalization
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normalize_total_area() - Total Area Normalization
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normalize_vsn() - Variance Stabilizing Normalization
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remove_constant() - Remove Constant Variables
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remove_low_cv() - Remove Variables with Low Coefficient of Variation
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remove_low_expr() - Remove Variables with Low Expression
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remove_low_var() - Remove Variables with Low Variance Remove Variables with Low Variance
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remove_rare() - Remove Rare Variables with Too Many Missing Values