Package index • glyhub

GPST000009

glyhub_GPST000009_O(): Atlantic salmon epithelial mucin O-glycans

GPST000035

glyhub_GPST000035_O(): O-glycan profile of Fetuin_standard and related study experiments

GPST000079

glyhub_GPST000079_N(): Postnatal mouse skeletal-muscle N-glycome

GPST000120

glyhub_GPST000120_O_Spike_ACE2(): Released O-glycans of recombinant SARS-CoV-2 Spike and ACE2

GPST000125

glyhub_GPST000125_N_HEK293(): N-glycan profiles in HEK293 glycosylation-knockout cells
glyhub_GPST000125_O_HEK293(): O-glycan profiles in HEK293 glycosylation-knockout cells
glyhub_GPST000125_GSL_HEK293(): Glycosphingolipid glycan profiles in HEK293 glycosylation-knockout cells

GPST000128

glyhub_GPST000128_n_precursor(): Red-blood-cell N-glycan precursor quantification
glyhub_GPST000128_o_precursor(): Red-blood-cell O-glycan precursor quantification

GPST000170

glyhub_GPST000170_N(): Ion-source dopant effects on N-glycan signal
glyhub_GPST000170_O(): Ion-source dopant effects on O-glycan signal

GPST000183

glyhub_GPST000183_n(): MLL-rearranged B-cell precursor ALL N-glycome
glyhub_GPST000183_o(): MLL-rearranged B-cell precursor ALL O-glycome

GPST000190

glyhub_GPST000190_N(): Linkage-specific sialic-acid derivatization of plasma N-glycans

GPST000211

glyhub_GPST000211_O(): O-glycans released by thrombin-activated human platelets

GPST000213

glyhub_GPST000213_N(): Mouse CTX (M) N-glycan source peak profiles and related study experiments
glyhub_GPST000213_O(): Mouse CTX (M) O-glycan source peak profiles and related study experiments

GPST000214

glyhub_GPST000214_N_AML_CellLines(): N-glycan profiles of 21 acute myeloid leukemia cell lines
glyhub_GPST000214_O_AML_CellLines(): O-glycan profiles of 21 acute myeloid leukemia cell lines

GPST000239

glyhub_GPST000239_GSL(): Colorectal-cancer cell-line glycosphingolipid glycans

GPST000240

glyhub_GPST000240_N(): Brugia malayi N-glycans across life stages
glyhub_GPST000240_GSL(): Brugia malayi glycosphingolipid glycans across life stages

GPST000271

glyhub_GPST000271_N_CAL51(): N-glycan profiles in CAL51 Golgi knockout cells
glyhub_GPST000271_O_CAL51(): O-glycan profiles in CAL51 Golgi knockout cells

GPST000294

glyhub_GPST000294_O_Celegans_Development(): Caenorhabditis elegans developmental O-glycan profiles
glyhub_GPST000294_N_Celegans_L4(): Caenorhabditis elegans L4 N-glycans across culture and release fractions

GPST000296

glyhub_GPST000296_N(): Oral tumor N-glycans associated with lymph node metastasis
glyhub_GPST000296_N_Glycoproteomics(): Site-specific N-glycoproteome of oral squamous-cell carcinoma tissues

GPST000297

glyhub_GPST000297_O(): Cornu aspersum mucus O-glycan profiles
glyhub_GPST000297_N(): Cornu aspersum mucus N-glycan profiles

GPST000299

glyhub_GPST000299_N(): Onchocerca volvulus adult-female N glycan profile
glyhub_GPST000299_GSL(): Onchocerca volvulus adult-female GSL glycan profile

GPST000351

glyhub_GPST000351_N(): Plasma N-glycomes of ASGR1- and MRC1-deficient mice under dietary challenge

GPST000374

glyhub_GPST000374_sssmug_gsl(): SSSMuG: Same Sample Sequential Multi-Glycomics.
glyhub_GPST000374_sssmug_n(): SSSMuG: Same Sample Sequential Multi-Glycomics.
glyhub_GPST000374_O(): SSSMuG: Same Sample Sequential Multi-Glycomics. and related study experiments

GPST000381

glyhub_GPST000381_N_Prosaposin(): Released N-glycans of pSAP65 and pSAP75 prosaposin forms

GPST000403

glyhub_GPST000403_N(): Rat serum N-glycans after chronic herbicide exposure

GPST000431

glyhub_GPST000431_N(): Swift Universal Glycan Acquisition (SUGA) Enables Quantitative Glycan Profiling across Diverse Sample Types. and related study experiments

GPST000460

glyhub_GPST000460_N(): Cardiac N-glycomes in fatal COVID-19

GPST000473

glyhub_GPST000473_N(): N-glycan remodeling after TANGO2 loss

GPST000533

glyhub_GPST000533_N_Released(): Desialylated haptoglobin released N-glycans in sepsis serum
glyhub_GPST000533_N_Glycopeptides(): Desialylated haptoglobin glycopeptides in sepsis serum

GPST000534

glyhub_GPST000534_N(): N-glycan profiles of two tardigrade species

GPST000562

glyhub_GPST000562_CS_DS(): CS/DS disaccharide amounts in A549 and BEAS-2B small extracellular vesicles

GPST000578

glyhub_GPST000578_N_total_peak_area(): Immunoglobulins N-glycan total peak areas and related study experiments
glyhub_GPST000578_N_source_repeatability_intensity(): Ovalbumin N-glycan repeatability profiles and related study experiments
glyhub_GPST000578_N_Fetuin_TwoSites(): Fetuin N-glycan peak areas across two instrument sites

GPST000584

glyhub_GPST000584_N(): Serum N-glycan profiles across hepatocellular carcinoma progression

GPST000585

glyhub_GPST000585_N(): Bladder-tissue N-glycans across cancer stages

GPST000596

glyhub_GPST000596_N(): Platelet N-glycan isomer profiles in control and FUT8-knockout mice

GPST000599

glyhub_GPST000599_serum_n(): Septic shock longitudinal serum N-glycome

GPST000601

glyhub_GPST000601_N_glycopeptides(): Rat serum N-glycopeptides across repeated sampling
glyhub_GPST000601_N(): Longitudinal rat-serum released N-glycans

GPST000602

glyhub_GPST000602_Sh_GSL(): Major human schistosome species express different glycans with immunological and diagnostic implications
glyhub_GPST000602_Sm_GSL(): Major human schistosome species express different glycans with immunological and diagnostic implications
glyhub_GPST000602_Sh_N(): Major human schistosome species express different glycans with immunological and diagnostic implications
glyhub_GPST000602_Sm_N(): Major human schistosome species express different glycans with immunological and diagnostic implications
glyhub_GPST000602_Sh_O(): Major human schistosome species express different glycans with immunological and diagnostic implications

GPST000604

glyhub_GPST000604_HS(): Heparan sulfate disaccharide profiles measured by HILIC-Q-TOF-MS
glyhub_GPST000604_CS_DS(): Chondroitin/dermatan sulfate disaccharide profiles measured by HILIC-Q-TOF-MS

GPST000625

glyhub_GPST000625_N(): Human intervertebral-disc N-glycan chromatographic profiles

GPST000643

glyhub_GPST000643_O(): Fucosidase treatment of porcine colonic mucin O-glycans and related study experiments
glyhub_GPST000643_N(): GH20 activity on N-glycans from pretreated PSGL-1 and related study experiments

GPST000647

glyhub_GPST000647_N(): Whole-brain N-glycans in Slc35a3-deficient mice

GPST000650

glyhub_GPST000650_O(): Whole-brain O-glycans in Slc35a3-deficient mice

GPST000667

glyhub_GPST000667_N(): N-glycan profiles of A549 and BEAS-2B small extracellular vesicles and culture media

GPST000671

glyhub_GPST000671_N_Glycoproteomics(): Site-resolved N-glycoform proportions during influenza infection of A549 cells
glyhub_GPST000671_O_Glycoproteomics(): Site-resolved O-glycoform proportions during influenza infection of A549 cells
glyhub_GPST000671_N(): N-glycomes of influenza-infected A549 organelle and secreted fractions
glyhub_GPST000671_O(): O-glycomes of influenza-infected A549 organelle and secreted fractions

GPST000676

glyhub_GPST000676_GAG(): Sulfatase modifying factors control the timing of zebrafish convergence and extension morphogenesis. and related study experiments

GPST000738

glyhub_GPST000738_N_B4GalT1(): Galactosylation of bovine fetuin N-glycans in an enzyme reactor
glyhub_GPST000738_N_ST6GAL1(): Sialylation of bovine fetuin N-glycans in an enzyme reactor

GPST000027 and GPST000031

glyhub_GPST000027_031_N(): Mgat3 mouse brain and kidney N-glycan source profiles

Data conventions

glyhub_data_conventions: Measurement and annotation conventions for glyhub datasets

CPTAC glycoproteomes

glyhub_CPTAC_CCRCC(): Clear cell renal cell carcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_COAD(): Colon adenocarcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_HGSC(): High-grade serous ovarian carcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_HNSCC(): Head and neck squamous cell carcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_LSCC(): Lung squamous cell carcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_LUAD(): Lung adenocarcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_PDAC(): Pancreatic ductal adenocarcinoma: CPTAC N-glycoproteome
glyhub_CPTAC_UCEC(): Uterine corpus endometrial carcinoma: CPTAC N-glycoproteome

Load and discover data

glyhub_load(): Load any glyhub dataset
glyhub_catalog(): List available glyhub datasets

Non-CPTAC datasets

glyhub_PXD070547_N_HumanAtlas(): Human organ atlas raw XIC matrix
glyhub_PXD052447_N_Solubility(): DQGlyco mouse brain solubility reporter intensities
glyhub_PXD065283_N_QC(): HCC study quality-control injections
glyhub_PXD065283_N_DiscoverySelected(): HCC discovery cohort selected processed features
glyhub_PXD052447_N_TwoFF(): DQGlyco 2-fluorofucose time course reporter intensities
glyhub_PXD052447_N_Microbiome(): DQGlyco microbiome experiment reporter intensities
glyhub_PXD011063_O_Dilution(): Glyco-DIA precursor peak areas in a dilution experiment
glyhub_PXD052447_N_Tissues(): DQGlyco mouse tissue reporter intensities
glyhub_PXD052447_N_PNGase(): DQGlyco PNGase accessibility reporter intensities
glyhub_PXD052447_N_ProteinaseK(): DQGlyco proteinase K accessibility reporter intensities
glyhub_IPX0011099000_N_Brain(): Mouse brain Glyco-Decipher chromatographic areas
glyhub_PXD046637_N_Lung(): Paired lung nodule glycoproteomics
glyhub_PXD011063_O_SerumSA(): Glyco-DIA SA serum source precursor peak areas
glyhub_MSV000089484_N_HCC(): pGlycoQuant HCC cell-line source intensities